edu.duke.cs.osprey
3.3
edu.duke.cs.osprey
/
edu.duke.cs.osprey.molscope.molecule
/
Molecule
/
Atoms
Atoms
inner
class
Atoms
:
List
<
Atom
>
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Functions
Properties
Functions
add
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fun
add
(
atom
:
Atom
)
:
Atom
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add
All
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fun
addAll
(
atoms
:
Collection
<
Atom
>
)
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contains
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open
operator override
fun
contains
(
element
:
Atom
)
:
Boolean
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contains
All
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open
override
fun
containsAll
(
elements
:
Collection
<
Atom
>
)
:
Boolean
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find
Or
Throw
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fun
findOrThrow
(
name
:
String
)
:
Atom
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for
Each
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open
fun
forEach
(
p0
:
Consumer
<
in
Atom
>
)
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get
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open
operator override
fun
get
(
index
:
Int
)
:
Atom
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index
Of
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open
override
fun
indexOf
(
element
:
Atom
)
:
Int
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is
Empty
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open
override
fun
isEmpty
(
)
:
Boolean
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iterator
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open
operator override
fun
iterator
(
)
:
Iterator
<
Atom
>
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last
Index
Of
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open
override
fun
lastIndexOf
(
element
:
Atom
)
:
Int
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list
Iterator
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open
override
fun
listIterator
(
)
:
ListIterator
<
Atom
>
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open
override
fun
listIterator
(
index
:
Int
)
:
ListIterator
<
Atom
>
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parallel
Stream
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open
fun
parallelStream
(
)
:
Stream
<
Atom
>
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remove
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fun
remove
(
atom
:
Atom
)
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spliterator
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open
override
fun
spliterator
(
)
:
Spliterator
<
Atom
>
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stream
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open
fun
stream
(
)
:
Stream
<
Atom
>
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sub
List
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open
override
fun
subList
(
fromIndex
:
Int
,
toIndex
:
Int
)
:
List
<
Atom
>
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to
Array
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open
fun
<
T
:
Any
>
toArray
(
p0
:
IntFunction
<
Array
<
T
>
>
)
:
Array
<
T
>
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Properties
size
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open
override
val
size
:
Int
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