Package edu.duke.cs.osprey.astar.conf

Class ConfIndex

java.lang.Object
edu.duke.cs.osprey.astar.conf.ConfIndex
public class ConfIndex extends Object

  • Field Details

    • numPos

      public final int numPos

    • node

      public ConfAStarNode node

    • numDefined

      public int numDefined

    • definedPos

      public final int[] definedPos

    • definedRCs

      public final int[] definedRCs

    • numUndefined

      public int numUndefined

    • undefinedPos

      public final int[] undefinedPos

  • Constructor Details

    • ConfIndex

      public ConfIndex(int numPos)

    • ConfIndex

      public ConfIndex(ConfIndex other)

  • Method Details

    • isFullyDefined

      public boolean isFullyDefined()

    • isDefined

      public boolean isDefined(int pos)

    • findDefined

      public int findDefined(int pos)

    • isUndefined

      public boolean isUndefined(int pos)

    • findUndefined

      public int findUndefined(int pos)

    • assign

      public ConfIndex assign(int nextPos, int nextRc)

    • assignInPlace

      public void assignInPlace(int pos, int rc)

    • unassign

      public ConfIndex unassign(int pos)

    • unassignInPlace

      public void unassignInPlace(int pos)

    • sortDefined

      public void sortDefined()
      ensures assigned and unassigned positions are sorted in increasing order

    • updateUndefined

      public void updateUndefined()
      Populates the unassigned positions, based on what's not assigned defined positions must be sorted

    • toString

      public String toString()
      Overrides:
      toString in class Object