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java.lang.ObjectRdcPanda.Hbond
public class Hbond
This class defines data structures related to h-bonds. Written by Lincong Wang (2001-2005).
Nested Class Summary | |
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static class |
Hbond.HbondComparatorA
The Class HbondComparatorA. |
static class |
Hbond.HbondComparatorB
The Class HbondComparatorB. |
Constructor Summary | |
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Hbond()
Constructors. |
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Hbond(int Ano,
java.lang.String A,
int Bno,
java.lang.String B,
java.lang.String id,
java.lang.String t)
Instantiates a new hbond. |
Method Summary | |
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java.lang.String |
getAtomA()
Gets the atom a. |
java.lang.String |
getAtomB()
Gets the atom b. |
java.lang.String |
getID()
Gets the iD. |
int |
getResidueNoA()
Gets the residue no a. |
int |
getResidueNoB()
Gets the residue no b. |
java.lang.String |
getType()
Gets the type. |
java.util.Vector |
hbOfTwoStrands(java.util.Vector hbVec,
java.lang.String ids)
Hb of two strands. |
java.util.Vector |
HbondReader(java.lang.String hbFile)
A very simple reader for H-bond data: see the attched file for the format. |
java.lang.String |
toString()
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Methods inherited from class java.lang.Object |
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equals, getClass, hashCode, notify, notifyAll, wait, wait, wait |
Constructor Detail |
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public Hbond()
public Hbond(int Ano, java.lang.String A, int Bno, java.lang.String B, java.lang.String id, java.lang.String t)
Ano
- the anoA
- the aBno
- the bnoB
- the bid
- the idt
- the tMethod Detail |
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public int getResidueNoA()
public int getResidueNoB()
public java.lang.String getAtomA()
public java.lang.String getAtomB()
public java.lang.String getID()
public java.lang.String getType()
public java.lang.String toString()
toString
in class java.lang.Object
public java.util.Vector HbondReader(java.lang.String hbFile)
hbFile
- the name of the file
public java.util.Vector hbOfTwoStrands(java.util.Vector hbVec, java.lang.String ids)
hbVec
- the hb vecids
- the ids
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