RdcPanda
Class Nasca.Node

java.lang.Object
  extended by RdcPanda.Nasca.Node
Enclosing class:
Nasca

public class Nasca.Node
extends java.lang.Object


Field Summary
 int asgedId
           
 int maxMappedID
           
 double maxMapScore
           
 int stereoID
           
 java.util.Vector vecCloseAdj
           
 java.util.Vector vecStereoSymSet
           
 java.util.Vector vecSymSet
           
 
Constructor Summary
Nasca.Node()
           
Nasca.Node(int idT)
           
Nasca.Node(int idT, double cs_H, double cs_heavy, boolean isAsged)
           
Nasca.Node(int idT, int resIDT, java.lang.String res, java.lang.String atom, java.util.Vector vecAtom)
           
Nasca.Node(Nasca.Node nd)
           
 
Method Summary
 void AddAdj(Nasca.Node ndNeigh)
           
 void AddAdjNOESY(Noesy noesy)
           
 void AddCloseAdj(Nasca.Node ndNeigh)
           
 void AddCoord(Cartesian coord)
           
 void addMappingNode(Nasca.Node node)
           
 void DelAdj(int idNeigh)
           
 void EmptyAdjSet()
           
 void EmptyMappingSet()
           
 java.util.Vector getAdjVec()
           
 int getAssignProtonID()
           
 java.lang.String getAtomName()
           
 java.util.Vector getAtomVec()
           
 double getHeavyCS()
           
 int getID()
           
 boolean getIsAssigned()
           
 boolean getIsRestrained()
           
 java.util.Vector getMappingSet()
           
 double getProtonCS()
           
 java.lang.String getResName()
           
 int getResNo()
           
 void setAssignedID(int IDno)
           
 void setAtomName(java.lang.String atom)
           
 void setCSLower(double cs_L)
           
 void setCSUpper(double cs_U)
           
 void setHeavyCS(double cs_heavy)
           
 void setIsAssigned(boolean tf)
           
 void setIsRestrained(boolean isRsd)
           
 void setNodeID(int no)
           
 void setProtonCS(double cs_h)
           
 void setResName(java.lang.String res)
           
 void setResNo(int no)
           
 
Methods inherited from class java.lang.Object
equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
 

Field Detail

stereoID

public int stereoID

maxMapScore

public double maxMapScore

maxMappedID

public int maxMappedID

asgedId

public int asgedId

vecStereoSymSet

public java.util.Vector vecStereoSymSet

vecSymSet

public java.util.Vector vecSymSet

vecCloseAdj

public java.util.Vector vecCloseAdj
Constructor Detail

Nasca.Node

public Nasca.Node(Nasca.Node nd)

Nasca.Node

public Nasca.Node()

Nasca.Node

public Nasca.Node(int idT)

Nasca.Node

public Nasca.Node(int idT,
                  int resIDT,
                  java.lang.String res,
                  java.lang.String atom,
                  java.util.Vector vecAtom)

Nasca.Node

public Nasca.Node(int idT,
                  double cs_H,
                  double cs_heavy,
                  boolean isAsged)
Method Detail

getID

public int getID()

getResNo

public int getResNo()

getResName

public java.lang.String getResName()

getAtomName

public java.lang.String getAtomName()

getAtomVec

public java.util.Vector getAtomVec()

getAdjVec

public java.util.Vector getAdjVec()

getProtonCS

public double getProtonCS()

getHeavyCS

public double getHeavyCS()

setProtonCS

public void setProtonCS(double cs_h)

setIsAssigned

public void setIsAssigned(boolean tf)

setHeavyCS

public void setHeavyCS(double cs_heavy)

setResNo

public void setResNo(int no)

setNodeID

public void setNodeID(int no)

setResName

public void setResName(java.lang.String res)

setAtomName

public void setAtomName(java.lang.String atom)

getIsAssigned

public boolean getIsAssigned()

setCSLower

public void setCSLower(double cs_L)

setCSUpper

public void setCSUpper(double cs_U)

setAssignedID

public void setAssignedID(int IDno)

addMappingNode

public void addMappingNode(Nasca.Node node)

getMappingSet

public java.util.Vector getMappingSet()

getAssignProtonID

public int getAssignProtonID()

getIsRestrained

public boolean getIsRestrained()

setIsRestrained

public void setIsRestrained(boolean isRsd)

EmptyMappingSet

public void EmptyMappingSet()

EmptyAdjSet

public void EmptyAdjSet()

AddCoord

public void AddCoord(Cartesian coord)

DelAdj

public void DelAdj(int idNeigh)

AddAdjNOESY

public void AddAdjNOESY(Noesy noesy)

AddCloseAdj

public void AddCloseAdj(Nasca.Node ndNeigh)

AddAdj

public void AddAdj(Nasca.Node ndNeigh)