Uses of Package
RdcPanda

Packages that use RdcPanda
RdcPanda   
 

Classes in RdcPanda used by RdcPanda
Assign
          This class provides functions that involves NOE assignment, such initial NOE assignment using only chemical shift information, pruning ambiguous NOE assignments using given structural information,etc.
BackNoe
          This class provides functions that involves back-computed NOEs.
Cartesian
          This class defines Cartesian coordinates for individual atom in protein structure.
Dipolar
          This class provides data structures processing experimental RDC data.
Goal.TreePdb
           
H1CS
          This class provides data structures that involve chemical shifts.
HcchTocsy
          This class defines data structures related to HcchTocsy.
Hdist
          This class provides data structures related to back-computed NOE distance restraints.
HnNoe
          This class defines data structures related to N-15 labeled NOEs.
IDof2aryStructure
          This class provides functions for processing files with secondary structure element information.
Matrix
          This class is modified from the Jama numeric package.
Nasca.Node
           
Noe
          This class provides data structures and functions for processing NOE assignment.
Noesy
          This class provides data structures and functions for processing NOESY spectra.
Pdb
          This class provides data structures and functions for processing and generating PDB files and extracting backbone angles etc.
PhiPsi
          Various methods for exact solution and systematic search including the computation of rotation to the frist peptide plane the DFS-search and solver of the quartic equation and the computation of \phi and \psi angles from two vectors in consecutive planse etc.
RotaPattern
          This class implements data structures and functions that deal with the rotamer properties.
SingularValueDecomposition
          This class provides functions for SVD operations (from Jama package).
sp3Carbon
          represeting the tetrahedral of the sp3 Carbon configuration IN order to compute the coordinates we need only to know the coordinates of the top atom then using the information provided by the sp3Carbon object we should be able to compute all the coordinates of other atoms.