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java.lang.ObjectRdcPanda.SSEPacking
public class SSEPacking
This class provides functions for packing SSE fragments. Written by Jianyang (Michael) Zeng (2005-2009).
Nested Class Summary | |
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static class |
SSEPacking.SSEPackingComparator
The Class SSEPackingComparator. |
Constructor Summary | |
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SSEPacking()
Instantiates a new sSE packing. |
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SSEPacking(double dbT,
double dbP,
double dbR,
double dbS)
Instantiates a new sSE packing. |
Method Summary | |
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double |
getLengthR()
Gets the length r. |
double |
getPhi()
Gets the phi. |
double |
getScore()
Gets the score. |
double |
getTheta()
Gets the theta. |
static void |
main1(java.lang.String[] argv)
Main function for testing. |
static void |
PackingHelicesBasedOnNOEPatterns(java.lang.String[] argv)
Packing helices based on noe patterns. |
static void |
SSEsOneToOnePacking(java.lang.String[] argv)
packing two single SSEs using sparse NOE restraints. |
Methods inherited from class java.lang.Object |
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equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
Constructor Detail |
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public SSEPacking()
public SSEPacking(double dbT, double dbP, double dbR, double dbS)
dbT
- the db tdbP
- the db pdbR
- the db rdbS
- the db sMethod Detail |
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public double getTheta()
public double getPhi()
public double getLengthR()
public double getScore()
public static void SSEsOneToOnePacking(java.lang.String[] argv) throws JampackException
argv
- the argv
JampackException
- the jampack exceptionpublic static void PackingHelicesBasedOnNOEPatterns(java.lang.String[] argv) throws JampackException
argv
- the argv
JampackException
- the jampack exceptionpublic static void main1(java.lang.String[] argv) throws JampackException
argv
- the argv
JampackException
- the jampack exception
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